| Fr., 16.04.1999 | VfB Leipzig - FC Rot-Weiß Erfurt | 2:0 |
| Sa., 17.04.1999 | FSV Zwickau - Eisenhüttenstädter FC Stahl | 3:0 |
| Sa., 17.04.1999 | 1. FC Union Berlin - 1. FC Dynamo Dresden | 2:2 |
| Sa., 17.04.1999 | FC Carl Zeiss Jena - FC Sachsen Leipzig | 3:1 |
| Sa., 17.04.1999 | Dresdner SC - FC Berlin | 1:2 |
| Sa., 17.04.1999 | SV Babelsberg 03 - FC Erzgebirge Aue | 2:1 |
| Sa., 17.04.1999 | SD Croatia Berlin - Spandauer SV | 2:1 |
| So., 18.04.1999 | VFC Plauen - FSV Lok Altmark Stendal | 0:2 |
| So., 18.04.1999 | 1. FC Magdeburg - Chemnitzer FC | 0:1 |
| Sp. | S-U-N | Tore | Diff. | P | ||||
|---|---|---|---|---|---|---|---|---|
| 1. |  |  | Chemnitzer FC | 30 | 20-7-3 | 51:12 | 39 | 67 |
| 2. | |  | VfB Leipzig | 30 | 19-5-6 | 51:26 | 25 | 62 |
| 3. |  |  | FSV Zwickau | 30 | 18-6-6 | 50:27 | 23 | 60 |
| 4. |  |  | 1. FC Union Berlin | 30 | 17-5-8 | 54:19 | 35 | 56 |
| 5. | |  | 1. FC Magdeburg | 29 | 15-8-6 | 44:28 | 16 | 53 |
| 6. | |  | VFC Plauen | 30 | 14-10-6 | 48:36 | 12 | 52 |
| 7. | |  | FC Erzgebirge Aue | 30 | 14-6-10 | 41:32 | 9 | 48 |
| 8. | |  | FC Berlin | 30 | 13-8-9 | 42:34 | 8 | 47 |
| 9. | |  | FC Carl Zeiss Jena | 30 | 13-7-10 | 33:29 | 4 | 46 |
| 10. | |  | FC Rot-Weiß Erfurt | 29 | 11-8-10 | 34:37 | -3 | 41 |
| 11. | |  | FSV Lok Altmark Stendal | 29 | 10-3-16 | 28:47 | -19 | 33 |
| 12. | |  | SV Babelsberg 03 | 30 | 7-10-13 | 32:45 | -13 | 31 |
| 13. | |  | FC Sachsen Leipzig | 29 | 7-9-13 | 38:53 | -15 | 30 |
| 14. | |  | 1. FC Dynamo Dresden | 30 | 7-7-16 | 32:42 | -10 | 28 |
| 15. | |  | Dresdner SC | 30 | 6-8-16 | 24:48 | -24 | 26 |
| 16. | |  | Spandauer SV | 30 | 6-7-17 | 25:45 | -20 | 25 |
| 17. | |  | SD Croatia Berlin | 30 | 6-2-22 | 19:54 | -35 | 20 |
| 18. | |  | Eisenhüttenstädter FC Stahl | 30 | 3-8-19 | 28:60 | -32 | 17 |