| Sa., 28.01.2012 | FC Rot-Weiß Erfurt - VfB Stuttgart II | 3:1 |
| Sa., 28.01.2012 | SV Wacker Burghausen - SV Werder Bremen II | 3:1 |
| Sa., 28.01.2012 | 1. FC Saarbrücken - SV Babelsberg 03 | 2:2 |
| Sa., 28.01.2012 | 1. FC Heidenheim 1846 - Rot-Weiß Oberhausen | 1:0 |
| Sa., 28.01.2012 | Kickers Offenbach - Chemnitzer FC | 0:1 |
| Sa., 28.01.2012 | SV Sandhausen - SpVgg Unterhaching | 3:1 |
| Sa., 28.01.2012 | Arminia Bielefeld - SV Darmstadt 98 | 3:2 |
| Sa., 28.01.2012 | SV Wehen Wiesbaden - VfR Aalen | 1:3 |
| Mi., 21.03.2012 | SSV Jahn Regensburg - VfL Osnabrück | 0:3 |
| Di., 27.03.2012 | SC Preußen Münster - FC Carl Zeiss Jena | 1:0 |
| Sp. | S-U-N | Tore | Diff. | P | ||||
|---|---|---|---|---|---|---|---|---|
| 1. |  |  | SV Sandhausen | 22 | 11-7-4 | 32:23 | 9 | 40 |
| 2. |  |  | SSV Jahn Regensburg | 22 | 10-8-4 | 36:20 | 16 | 38 |
| 3. |  |  | VfR Aalen | 22 | 10-7-5 | 28:21 | 7 | 37 |
| 4. | |  | SV Wacker Burghausen | 23 | 8-11-4 | 36:29 | 7 | 35 |
| 5. | |  | 1. FC Saarbrücken | 23 | 8-10-5 | 40:30 | 10 | 34 |
| 6. | |  | 1. FC Heidenheim 1846 | 23 | 9-7-7 | 26:24 | 2 | 34 |
| 7. | |  | FC Rot-Weiß Erfurt | 23 | 8-9-6 | 28:24 | 4 | 33 |
| 8. | |  | VfB Stuttgart II | 23 | 8-9-6 | 27:29 | -2 | 33 |
| 9. | |  | Kickers Offenbach | 22 | 9-5-8 | 27:24 | 3 | 32 |
| 10. | |  | Chemnitzer FC | 23 | 9-5-9 | 26:28 | -2 | 32 |
| 11. | |  | VfL Osnabrück | 21 | 6-11-4 | 22:17 | 5 | 29 |
| 12. | |  | SV Babelsberg 03 | 23 | 7-8-8 | 33:34 | -1 | 29 |
| 13. | |  | Arminia Bielefeld | 23 | 7-8-8 | 31:35 | -4 | 29 |
| 14. | |  | SpVgg Unterhaching | 22 | 8-4-10 | 37:33 | 4 | 28 |
| 15. | |  | SC Preußen Münster | 22 | 6-10-6 | 23:26 | -3 | 28 |
| 16. | |  | SV Darmstadt 98 | 23 | 7-6-10 | 31:33 | -2 | 27 |
| 17. | |  | SV Wehen Wiesbaden | 22 | 6-8-8 | 25:28 | -3 | 26 |
| 18. | |  | Rot-Weiß Oberhausen | 23 | 4-8-11 | 20:30 | -10 | 20 |
| 19. | |  | FC Carl Zeiss Jena | 22 | 4-6-12 | 24:43 | -19 | 18 |
| 20. | |  | SV Werder Bremen II | 23 | 3-7-13 | 22:43 | -21 | 16 |