| Fr., 21.05.2004 | SV Werder Bremen II - 1. FC Dynamo Dresden | 0:4 |
| Sa., 22.05.2004 | SC Paderborn - Chemnitzer FC | 4:0 |
| Sa., 22.05.2004 | KFC Uerdingen - SG Wattenscheid 09 | 0:3 |
| Sa., 22.05.2004 | VfR Neumünster - FC St. Pauli | 0:1 |
| Sa., 22.05.2004 | 1. FC Köln II - Wuppertaler SV | 4:0 |
| Sa., 22.05.2004 | FC Sachsen Leipzig - Hamburger SV II | 0:1 |
| Sa., 22.05.2004 | Borussia Dortmund II - Holstein Kiel | 2:0 |
| Sa., 22.05.2004 | FC Schalke 04 II - Rot-Weiß Essen | 0:7 |
| Sa., 22.05.2004 | Eintracht Braunschweig - SC Preußen Münster | 1:3 |
| Sp. | S-U-N | Tore | Diff. | P | ||||
|---|---|---|---|---|---|---|---|---|
| 1. |  |  | Rot-Weiß Essen | 32 | 21-5-6 | 72:25 | 47 | 68 |
| 2. | |  | 1. FC Dynamo Dresden | 32 | 17-11-4 | 50:25 | 25 | 62 |
| 3. | |  | Wuppertaler SV | 32 | 17-8-7 | 47:35 | 12 | 59 |
| 4. |  |  | SC Paderborn | 32 | 16-10-6 | 50:36 | 14 | 58 |
| 5. |  |  | SV Werder Bremen II | 32 | 16-7-9 | 55:41 | 14 | 55 |
| 6. | |  | Eintracht Braunschweig | 32 | 13-7-12 | 44:40 | 4 | 46 |
| 7. | |  | FC St. Pauli | 32 | 12-7-13 | 41:36 | 5 | 43 |
| 8. | |  | Borussia Dortmund II | 32 | 12-7-13 | 42:42 | 0 | 43 |
| 9. | |  | KFC Uerdingen | 32 | 12-6-14 | 44:47 | -3 | 42 |
| 10. | |  | 1. FC Köln II | 32 | 10-10-12 | 52:50 | 2 | 40 |
| 11. | |  | SG Wattenscheid 09 | 32 | 11-7-14 | 51:57 | -6 | 40 |
| 12. | |  | Chemnitzer FC | 32 | 12-4-16 | 29:43 | -14 | 40 |
| 13. | |  | Holstein Kiel | 32 | 10-8-14 | 48:54 | -6 | 38 |
| 14. | |  | SC Preußen Münster | 32 | 9-11-12 | 37:43 | -6 | 38 |
| 15. | |  | Hamburger SV II | 32 | 9-11-12 | 29:46 | -17 | 38 |
| 16. | |  | FC Schalke 04 II | 32 | 9-8-15 | 46:66 | -20 | 35 |
| 17. | |  | FC Sachsen Leipzig | 32 | 4-12-16 | 33:51 | -18 | 24 |
| 18. | |  | VfR Neumünster | 32 | 3-11-18 | 30:63 | -33 | 20 |