| Fr., 10.02.2012 | SC Preußen Münster - SV Werder Bremen II | 0:0 |
| Sa., 11.02.2012 | 1. FC Saarbrücken - VfB Stuttgart II | 0:0 |
| Sa., 11.02.2012 | 1. FC Heidenheim 1846 - SV Babelsberg 03 | 5:0 |
| Di., 21.02.2012 | SV Wehen Wiesbaden - Arminia Bielefeld | 0:0 |
| Di., 28.02.2012 | FC Rot-Weiß Erfurt - VfR Aalen | 0:1 |
| Mi., 07.03.2012 | SV Sandhausen - Chemnitzer FC | 0:3 |
| Mi., 07.03.2012 | SV Wacker Burghausen - VfL Osnabrück | 2:0 |
| Di., 13.03.2012 | SSV Jahn Regensburg - SV Darmstadt 98 | 2:1 |
| Mi., 14.03.2012 | SpVgg Unterhaching - Rot-Weiß Oberhausen | 1:2 |
| Di., 20.03.2012 | Kickers Offenbach - FC Carl Zeiss Jena | 1:1 |
| Sp. | S-U-N | Tore | Diff. | P | ||||
|---|---|---|---|---|---|---|---|---|
| 1. |  |  | VfR Aalen | 24 | 12-7-5 | 32:22 | 10 | 43 |
| 2. | |  | SV Sandhausen | 24 | 12-7-5 | 35:26 | 9 | 43 |
| 3. | |  | SSV Jahn Regensburg | 23 | 10-8-5 | 37:22 | 15 | 38 |
| 4. |  |  | 1. FC Heidenheim 1846 | 24 | 10-7-7 | 31:24 | 7 | 37 |
| 5. | |  | 1. FC Saarbrücken | 25 | 8-12-5 | 42:32 | 10 | 36 |
| 6. |  |  | FC Rot-Weiß Erfurt | 24 | 9-9-6 | 31:26 | 5 | 36 |
| 7. | |  | SV Wacker Burghausen | 23 | 8-11-4 | 36:29 | 7 | 35 |
| 8. | |  | Chemnitzer FC | 24 | 10-5-9 | 31:29 | 2 | 35 |
| 9. | |  | VfB Stuttgart II | 24 | 8-10-6 | 27:29 | -2 | 34 |
| 10. | |  | Kickers Offenbach | 23 | 9-6-8 | 28:25 | 3 | 33 |
| 11. | |  | VfL Osnabrück | 23 | 7-11-5 | 26:20 | 6 | 32 |
| 12. | |  | SC Preußen Münster | 24 | 7-11-6 | 25:26 | -1 | 32 |
| 13. | |  | SV Wehen Wiesbaden | 24 | 7-8-9 | 26:30 | -4 | 29 |
| 14. | |  | Arminia Bielefeld | 24 | 7-8-9 | 32:38 | -6 | 29 |
| 15. | |  | SV Babelsberg 03 | 25 | 7-8-10 | 33:41 | -8 | 29 |
| 16. | |  | SpVgg Unterhaching | 23 | 8-4-11 | 38:38 | 0 | 28 |
| 17. | |  | SV Darmstadt 98 | 24 | 7-6-11 | 31:34 | -3 | 27 |
| 18. | |  | Rot-Weiß Oberhausen | 24 | 4-9-11 | 21:31 | -10 | 21 |
| 19. | |  | FC Carl Zeiss Jena | 22 | 4-6-12 | 24:43 | -19 | 18 |
| 20. | |  | SV Werder Bremen II | 25 | 3-9-13 | 24:45 | -21 | 18 |